STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1115PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: mac:MA3989 aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase. (561 aa)    
Predicted Functional Partners:
Aboo_0604
Glycerate kinase; KEGG: tsi:TSIB_1605 putative glycerate kinase; PFAM: MOFRL domain protein.
    
  0.900
Aboo_1116
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mac:MA0823 ss-DNA-specific exonuclease.
       0.645
Aboo_1113
KEGG: tga:TGAM_0963 sodium:solute symporter family protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.545
Aboo_1114
KEGG: pab:PAB1840 hypothetical protein.
       0.545
Aboo_1541
MoaD family protein; KEGG: tsi:TSIB_1008 putative molybdopterin converting factor, subunit 1; TIGRFAM: MoaD family protein; PFAM: thiamineS protein.
 
   
 0.533
Aboo_0088
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pho:PH1750 ferredoxin.
   
 
 0.530
ribK
CTP-dependent riboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
       0.529
eif2b
Translation initiation factor aIF-2, beta subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family.
       0.523
Aboo_1118
KEGG: pto:PTO0970 hypothetical protein; PFAM: Protein of unknown function DUF652; SMART: Nucleotide binding protein PINc.
       0.523
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.