STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1157KEGG: mtp:Mthe_1233 helix-turn-helix, type 11 domain-containing protein. (261 aa)    
Predicted Functional Partners:
Aboo_1158
SMART: cation transporting ATPase domain protein; TIGRFAM: plasma-membrane proton-efflux P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: mja:MJ1226 plasma membrane ATPase 1 (aha1); PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase.
 
     0.606
Aboo_1196
KEGG: mbn:Mboo_0490 hypothetical protein.
  
     0.595
Aboo_0537
PFAM: Protein of unknown function UPF0179; KEGG: mvu:Metvu_0671 protein of unknown function UPF0179; Belongs to the UPF0179 family.
  
     0.576
mptD
Protein of unknown function DUF381; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD).
  
     0.573
ef1b
Translation elongation factor aEF-1 beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
 
     0.547
Aboo_0396
KEGG: afu:AF0281 hypothetical protein.
  
     0.537
Aboo_0611
PFAM: amidohydrolase; KEGG: pto:PTO0711 N-ethylammeline chlorohydrolase.
 
     0.498
mptE
Protein of unknown function DUF115; Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6-hydroxymethyl- 7,8-dihydropterin diphosphate (6-HMDP).
 
     0.498
Aboo_0923
PUA domain containing protein; KEGG: tvo:TVN1069 queuine tRNA-ribosyltransferase; PFAM: PUA domain containing protein; SMART: PUA domain containing protein.
  
     0.496
Aboo_1417
PFAM: phosphoribosyltransferase; KEGG: tac:Ta1164 orotate phosphoribosyltransferase-like protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
     0.485
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.