STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1270KEGG: pab:PAB1713 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1. (221 aa)    
Predicted Functional Partners:
Aboo_1269
PFAM: LamB/YcsF family protein; KEGG: pho:PH0986 LamB/YcsF family protein.
  
 0.999
Aboo_1271
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: tsi:TSIB_0728 allophanate hydrolase, subunit 2; SMART: Allophanate hydrolase subunit 2.
 
 0.999
Aboo_1261
H(+)-transporting two-sector ATPase; KEGG: pfu:PF0183 V-type ATP synthase subunit B; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein.
       0.553
atpA
ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.553
atpF
Vacuolar H+transporting two-sector ATPase F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.553
Aboo_1264
PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: mmq:MmarC5_0551 V-type ATP synthase subunit C.
       0.553
Aboo_1265
PFAM: H+transporting two-sector ATPase E subunit; KEGG: mka:MK1014 V-type ATP synthase subunit E.
       0.553
Aboo_1266
H(+)-transporting two-sector ATPase; KEGG: mka:MK1013 vacuolar-type H+-ATPase subunit K; PFAM: H+transporting two-sector ATPase C subunit.
       0.553
Aboo_1267
PFAM: V-type ATPase 116 kDa subunit; KEGG: mhu:Mhun_1775 V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
       0.553
Aboo_1268
KEGG: mfe:Mefer_0458 ATP synthase H subunit.
       0.553
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.