STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1485KEGG: mbu:Mbur_0715 hypothetical protein. (239 aa)    
Predicted Functional Partners:
Aboo_1484
KEGG: sto:ST0902 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.775
Aboo_1486
PFAM: MgtE integral membrane region; KEGG: msi:Msm_1275 MgtE-like divalent cation transporter.
       0.596
Aboo_1481
KEGG: tvo:TVN0628 hypothetical protein.
       0.594
Aboo_1482
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_2328 fibronectin, type III domain-containing protein.
     
 0.569
Aboo_1483
PFAM: protein of unknown function DUF214; KEGG: rpk:RPR_06655 lipoprotein releasing system transmembrane protein.
     
 0.569
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.