STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ60876.1Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component. (241 aa)    
Predicted Functional Partners:
EDZ60184.1
[G] COG1175 ABC-type sugar transport systems, permease components.
 
 0.999
EDZ60602.1
Extracellular solute-binding protein, family 1; [G] COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.998
EDZ60324.1
ABC transporter, ATP-binding protein; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.996
EDZ60588.1
Sugar ABC transporter, ATP-binding protein; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.996
EDZ59955.1
Conserved hypothetical protein; [S] COG5477 Predicted small integral membrane protein.
 
    0.952
gpsA
[C] COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.773
potB
[G] COG0395 ABC-type sugar transport system, permease component.
   
 
  0.595
yadG
ATP-binding component of ABC transporter; [V] COG1131 ABC-type multidrug transport system, ATPase component.
   
 
 0.563
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.504
EDZ59847.1
Putative sucrose phosphorylase; [G] COG0366 Glycosidases.
  
  
 0.415
Your Current Organism:
Pelagibacter sp. HTCC7211
NCBI taxonomy Id: 439493
Other names: C. Pelagibacter sp. HTCC7211, Candidatus Pelagibacter sp. HTCC7211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.