STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ60274.1Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. (198 aa)    
Predicted Functional Partners:
dsbB
[O] COG1495 Disulfide bond formation protein DsbB.
  
     0.767
EDZ60875.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.762
EDZ60848.1
[S] COG3820 Uncharacterized protein conserved in bacteria.
  
     0.733
EDZ59867.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.677
EDZ60469.1
[S] COG4765 Uncharacterized protein conserved in bacteria.
  
     0.665
EDZ60926.1
Putative transmembrane receptor; [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
     0.627
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.626
atpF
H+-transporting two-sector ATPase (subunit b); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.608
secB
Bacterial protein export chaperone; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
       0.593
fxsA
Cytoplasmic membrane protein; [R] COG3030 Protein affecting phage T7 exclusion by the F plasmid.
       0.593
Your Current Organism:
Pelagibacter sp. HTCC7211
NCBI taxonomy Id: 439493
Other names: C. Pelagibacter sp. HTCC7211, Candidatus Pelagibacter sp. HTCC7211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.