EDZ60628.1 protein (Pelagibacter sp. HTCC7211)

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Score

EDZ60628.1

GatB/Yqey; [S] COG1610 Uncharacterized conserved protein. (153 aa)

Predicted Functional Partners:

rpsU

0.922

dnaG

0.790

rpoD

0.610

carB

0.574

carA

0.571

rpsO

0.495

Your Current Organism:

Pelagibacter sp. HTCC7211

NCBI taxonomy Id: 439493
Other names: C. Pelagibacter sp. HTCC7211, Candidatus Pelagibacter sp. HTCC7211

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDZ60628.1	carA	PB7211_951	PB7211_1301	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	0.571
EDZ60628.1	carB	PB7211_951	PB7211_756	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	0.574
EDZ60628.1	dnaG	PB7211_951	PB7211_240	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	0.790
EDZ60628.1	rpoD	PB7211_951	PB7211_358	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.610
EDZ60628.1	rpsO	PB7211_951	PB7211_1046	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.495
EDZ60628.1	rpsU	PB7211_951	PB7211_282	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.922
carA	EDZ60628.1	PB7211_1301	PB7211_951	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	0.571
carA	carB	PB7211_1301	PB7211_756	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	0.999
carA	dnaG	PB7211_1301	PB7211_240	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	0.571
carA	rpoD	PB7211_1301	PB7211_358	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.468
carB	EDZ60628.1	PB7211_756	PB7211_951	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	0.574
carB	carA	PB7211_756	PB7211_1301	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	0.999
carB	dnaG	PB7211_756	PB7211_240	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	0.574
carB	rpoD	PB7211_756	PB7211_358	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.482
dnaG	EDZ60628.1	PB7211_240	PB7211_951	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	0.790
dnaG	carA	PB7211_240	PB7211_1301	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	0.571
dnaG	carB	PB7211_240	PB7211_756	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	Carbamoyl-phosphate synthase, large subunit; [I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; Belongs to the CarB family.	0.574
dnaG	rpoD	PB7211_240	PB7211_358	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.903
rpoD	EDZ60628.1	PB7211_358	PB7211_951	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	GatB/Yqey; [S] COG1610 Uncharacterized conserved protein.	0.610
rpoD	carA	PB7211_358	PB7211_1301	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	Carbamoyl-phosphate synthase, small subunit; [F] COG0518 GMP synthase - Glutamine amidotransferase domain; Belongs to the CarA family.	0.468