Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDZ60637.1Glycosyl transferase, group 1; [G] COG0297 Glycogen synthase. (334 aa)    
Predicted Functional Partners:
EDZ60660.1
Metallophosphoesterase; [S] COG2908 Uncharacterized protein conserved in bacteria.
     0.990
EDZ60095.1
Tetratricopeptide repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 0.897
manC
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase; [G] COG0662 Mannose-6-phosphate isomerase.
  
 
 0.877
EDZ60488.1
Diacylglycerol kinase catalytic domain protein, putative; [IR] COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
  
 
  0.727
EDZ60900.1
[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 0.566
EDZ60060.1
Hydroxyacylglutathione hydrolase; [J] COG0081 Ribosomal protein L1.
     
 0.535
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
  0.510
manB
[G] COG1109 Phosphomannomutase.
  
 
 0.494
EDZ59847.1
Putative sucrose phosphorylase; [G] COG0366 Glycosidases.
    
 0.481
rfbA
Glucose-1-phosphate thymidylyltransferase; [M] COG1210 UDP-glucose pyrophosphorylase.
  
 
 0.468
Your Current Organism:
Pelagibacter sp. HTCC7211
NCBI taxonomy Id: 439493
Other names: C. Pelagibacter sp. HTCC7211, Candidatus Pelagibacter sp. HTCC7211
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