STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ45858.1Conserved hypothetical protein. (87 aa)    
Predicted Functional Partners:
EDZ46925.1
Conserved hypothetical protein.
  
     0.679
EDZ48120.1
Inner-membrane translocator; [E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
       0.566
EDZ46399.1
Conserved hypothetical protein.
       0.544
EDZ47206.1
Conserved hypothetical protein; [S] COG2261 Predicted membrane protein.
  
     0.527
EDZ47619.1
[E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
       0.517
RBY4I_595
Sporulation related; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.472
EDZ46987.1
Conserved hypothetical protein.
  
     0.452
EDZ47636.1
Conserved hypothetical protein.
  
     0.451
EDZ48339.1
Caax amino terminal protease family protein.
  
     0.450
EDZ47787.1
[S] COG1872 Uncharacterized conserved protein; Belongs to the UPF0235 family.
  
     0.438
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.