STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_113Phenol hydroxylase, oxygenase component; [Q] COG2368 Aromatic ring hydroxylase. (522 aa)    
Predicted Functional Partners:
RBY4I_110
Phenol hydroxylase component B; [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
 
 0.889
EDZ47667.1
Peroxisomal bifunctional enzyme; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.754
EDZ48199.1
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
    
 0.754
paaN
Phenylacetic acid degradation protein paaN; [C] COG1012 NAD-dependent aldehyde dehydrogenases.
    
 0.744
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
 
     0.705
EDZ47179.1
[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
 
 0.691
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; [Q] COG3971 2-keto-4-pentenoate hydratase.
 
  
 0.671
RBY4I_82
Riboflavin kinase; [H] COG0196 FAD synthase.
 
   
 0.616
EDZ44876.1
Actinorhodin polyketide dimerase; [R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
 
 0.597
RBY4I_134
Chlorocatechol 1,2-dioxygenase; [Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.580
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.