STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ45992.1[R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. (206 aa)    
Predicted Functional Partners:
EDZ48295.1
Redoxin; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.974
coxB
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.943
EDZ46566.1
[C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 
 0.930
ctaG
Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.928
EDZ47373.1
Periplasmic protein thiol; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.923
regA
Photosynthetic apparatus regulatory protein RegA; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.823
EDZ46138.1
Cytochrome c, class I; [C] COG3474 Cytochrome c2.
 
  
 0.813
soxD_2
[C] COG3474 Cytochrome c2.
    
 0.794
ctaA
Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
 
 
 0.786
EDZ45798.1
[S] COG2847 Uncharacterized protein conserved in bacteria.
 
   
 0.775
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.