EDZ46025.1 protein (Rhodobacterales bacterium Y4I)

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EDZ46025.1

ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (551 aa)

Predicted Functional Partners:

rplM

0.932

rplC

0.931

rpsP

0.927

EDZ47474.1

0.922

rplU

0.922

rpsO

0.921

rpmE

0.921

rpsC

0.921

rpsG

0.919

rplT

0.918

Your Current Organism:

Rhodobacterales bacterium Y4I

NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDZ46025.1	EDZ47474.1	RBY4I_1237	RBY4I_2692	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	[J] COG0227 Ribosomal protein L28.	0.922
EDZ46025.1	rplC	RBY4I_1237	RBY4I_3493	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.931
EDZ46025.1	rplM	RBY4I_1237	RBY4I_1131	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.932
EDZ46025.1	rplT	RBY4I_1237	RBY4I_3899	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.918
EDZ46025.1	rplU	RBY4I_1237	RBY4I_3551	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.922
EDZ46025.1	rpmE	RBY4I_1237	RBY4I_2341	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	[J] COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	0.921
EDZ46025.1	rpsC	RBY4I_1237	RBY4I_3776	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.921
EDZ46025.1	rpsG	RBY4I_1237	RBY4I_314	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.919
EDZ46025.1	rpsO	RBY4I_1237	RBY4I_1944	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.921
EDZ46025.1	rpsP	RBY4I_1237	RBY4I_1498	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.927
EDZ47474.1	EDZ46025.1	RBY4I_2692	RBY4I_1237	[J] COG0227 Ribosomal protein L28.	ABC transporter, ATP-binding protein; [R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	0.922
EDZ47474.1	rplC	RBY4I_2692	RBY4I_3493	[J] COG0227 Ribosomal protein L28.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.998
EDZ47474.1	rplM	RBY4I_2692	RBY4I_1131	[J] COG0227 Ribosomal protein L28.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
EDZ47474.1	rplT	RBY4I_2692	RBY4I_3899	[J] COG0227 Ribosomal protein L28.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
EDZ47474.1	rplU	RBY4I_2692	RBY4I_3551	[J] COG0227 Ribosomal protein L28.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
EDZ47474.1	rpmE	RBY4I_2692	RBY4I_2341	[J] COG0227 Ribosomal protein L28.	[J] COG0254 Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.	0.998
EDZ47474.1	rpsC	RBY4I_2692	RBY4I_3776	[J] COG0227 Ribosomal protein L28.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
EDZ47474.1	rpsG	RBY4I_2692	RBY4I_314	[J] COG0227 Ribosomal protein L28.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
EDZ47474.1	rpsO	RBY4I_2692	RBY4I_1944	[J] COG0227 Ribosomal protein L28.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
EDZ47474.1	rpsP	RBY4I_2692	RBY4I_1498	[J] COG0227 Ribosomal protein L28.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998