STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46361.1Extracellular solute-binding protein, family 3; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (251 aa)    
Predicted Functional Partners:
EDZ46731.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; [E] COG0765 ABC-type amino acid transport system, permease component.
 0.999
EDZ48412.1
Amino acid ABC transporter, ATP-binding protein; [P] COG1135 ABC-type metal ion transport system, ATPase component.
 
  0.995
EDZ47936.1
[E] COG0765 ABC-type amino acid transport system, permease component.
  0.981
EDZ46559.1
Polar amino acid ABC transporter, inner membrane subunit; [E] COG0765 ABC-type amino acid transport system, permease component.
 
  0.980
EDZ45895.1
Polar amino acid uptake family ABC transporter, permease protein; [E] COG0765 ABC-type amino acid transport system, permease component.
 
  0.971
EDZ45888.1
Polar amino acid uptake family ABC transporter, permease protein; [E] COG0765 ABC-type amino acid transport system, permease component.
  0.857
EDZ47615.1
[P] COG1135 ABC-type metal ion transport system, ATPase component.
 
  0.841
RBY4I_909
[E] COG0765 ABC-type amino acid transport system, permease component.
  0.823
EDZ46648.1
[T] COG0642 Signal transduction histidine kinase.
   
 0.814
EDZ46759.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  0.786
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.