STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znuCHigh affinity zinc uptake system ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (255 aa)    
Predicted Functional Partners:
RBY4I_233
ABC-3; [P] COG0609 ABC-type Fe3+-siderophore transport system, permease component.
 0.999
znuA
Zinc ABC transporter, periplasmic zinc-binding protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
 
 0.997
zur
[P] COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
 0.986
sitD
ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD; [P] COG0609 ABC-type Fe3+-siderophore transport system, permease component.
  
 0.984
sitC
ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC; [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
 0.984
sitA
ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA; [P] COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.950
RBY4I_93
ABC transporter, ATP-binding protein; [P] COG1122 ABC-type cobalt transport system, ATPase component.
  
 
  0.881
EDZ48645.1
[R] COG0795 Predicted permeases; overlaps another CDS with the same product name.
     
 0.826
RBY4I_568
Glycine betaine/proline ABC transporter, permease protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
     
 0.822
EDZ46932.1
[R] COG0795 Predicted permeases; overlaps another CDS with the same product name.
     
  0.818
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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