STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46416.1SpoVR; [S] COG2719 Uncharacterized conserved protein. (504 aa)    
Predicted Functional Partners:
EDZ47358.1
PrkA AAA domain family; [T] COG2766 Putative Ser protein kinase.
 
  
 0.997
RBY4I_331
[S] COG2718 Uncharacterized conserved protein; Belongs to the UPF0229 family.
 
  
 0.997
EDZ46440.1
Protein in ptx operon 5'region; [GEPR] COG0477 Permeases of the major facilitator superfamily.
   
    0.719
EDZ47782.1
[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.566
EDZ47471.1
Hypothetical protein.
       0.509
EDZ47378.1
Outer membrane lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
   
    0.473
EDZ46194.1
Endonuclease/exonuclease/phosphatase family protein.
   
    0.412
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.