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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46449.1Hypothetical protein; [R] COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain); DUF58. (297 aa)    
Predicted Functional Partners:
EDZ48154.1
ATPase, AAA family; [R] COG0714 MoxR-like ATPases.
  
 0.985
EDZ46721.1
N-terminal double-transmembrane domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.962
EDZ47720.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.960
EDZ46217.1
[S] COG3816 Uncharacterized protein conserved in bacteria.
 
     0.772
EDZ47842.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.760
RBY4I_831
Conserved hypothetical protein; [S] COG3164 Predicted membrane protein.
  
     0.504
EDZ46058.1
Transcriptional regulator, XRE family; [K] COG1396 Predicted transcriptional regulators.
  
     0.495
nnrE
YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
     
 0.464
EDZ46581.1
[S] COG5458 Uncharacterized conserved protein.
  
     0.456
hyi
Hydroxypyruvate isomerase; [H] COG0117 Pyrimidine deaminase; Belongs to the hyi family.
       0.453
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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