STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46468.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (338 aa)    
Predicted Functional Partners:
RBY4I_327
Divergent polysaccharide deacetylase family; [L] COG2812 DNA polymerase III, gamma/tau subunits.
  
     0.740
EDZ46756.1
Conserved hypothetical protein.
  
     0.737
RBY4I_394
Conserved hypothetical protein.
  
     0.709
EDZ48156.1
Conserved hypothetical protein.
  
     0.704
RBY4I_498
Lipoprotein, putative.
  
     0.701
EDZ48129.1
Conserved hypothetical protein.
  
     0.691
EDZ48769.1
Lipoprotein, putative; [S] COG3147 Uncharacterized protein conserved in bacteria.
  
     0.686
EDZ47183.1
Peptidoglycan-binding domain 1.
  
     0.675
EDZ47907.1
Hypothetical protein.
  
     0.674
EDZ48096.1
Conserved hypothetical protein.
  
     0.661
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.