STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znuAZinc ABC transporter, periplasmic zinc-binding protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin. (333 aa)    
Predicted Functional Partners:
znuC
High affinity zinc uptake system ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 
 0.997
RBY4I_233
ABC-3; [P] COG0609 ABC-type Fe3+-siderophore transport system, permease component.
 
 
 0.968
sitB
ABC Mn+2/Fe+2 transporter, ATPase subunit SitB; [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.916
sitD
ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD; [P] COG0609 ABC-type Fe3+-siderophore transport system, permease component.
 
 
 0.850
zur
[P] COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
 
  
 0.845
sitC
ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC; [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
 
 0.825
sitA
ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA; [P] COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
  
0.676
modA
[P] COG0725 ABC-type molybdate transport system, periplasmic component.
  
  
 0.598
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
  0.560
RBY4I_93
ABC transporter, ATP-binding protein; [P] COG1122 ABC-type cobalt transport system, ATPase component.
     
  0.553
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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