STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46507.1Polysaccharide biosynthesis/export protein; [M] COG0797 Lipoproteins. (365 aa)    
Predicted Functional Partners:
EDZ46696.1
Succinoglycan biosynthesis transport protein ExoP, putative; [D] COG2894 Septum formation inhibitor-activating ATPase.
  
 0.997
kpsC
[M] COG3563 Capsule polysaccharide export protein.
 
  
 0.993
kpsT
Capsular polysaccharide export ATP-binding protein; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.973
kpsE
Capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family; [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.957
kpsS
[M] COG3562 Capsule polysaccharide export protein.
 
   
 0.897
EDZ47038.1
ABC transporter, permease protein.
 
  
 0.890
EDZ46505.1
Lipopolysaccharide biosynthesis; [L] COG0419 ATPase involved in DNA repair.
  
 0.851
RBY4I_620
Exopolysaccharide biosynthesis domain protein; [D] COG0489 ATPases involved in chromosome partitioning.
  
 0.749
RBY4I_498
Lipoprotein, putative.
  
     0.729
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
 
 0.719
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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