STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46599.1Conserved hypothetical protein. (219 aa)    
Predicted Functional Partners:
EDZ47717.1
Conserved hypothetical protein; [T] COG2202 FOG: PAS/PAC domain.
  
     0.711
RBY4I_327
Divergent polysaccharide deacetylase family; [L] COG2812 DNA polymerase III, gamma/tau subunits.
  
     0.703
EDZ48426.1
Membrane protein involved in colicin uptake; [S] COG2268 Uncharacterized protein conserved in bacteria.
  
     0.697
EDZ46489.1
Surface presentation of antigens protein.
  
     0.692
EDZ48059.1
Pyridoxamine 5'-phosphate oxidase family protein; [P] COG0748 Putative heme iron utilization protein.
       0.685
EDZ47055.1
Conserved hypothetical protein.
  
     0.670
EDZ47550.1
Conserved hypothetical protein.
  
     0.657
EDZ47951.1
Conserved hypothetical protein.
  
     0.645
RBY4I_238
Conserved hypothetical protein.
  
     0.603
EDZ45934.1
Conserved hypothetical protein.
  
     0.585
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.