STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46645.1Amidohydrolase 3; [R] COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. (604 aa)    
Predicted Functional Partners:
EDZ47712.1
[P] COG3119 Arylsulfatase A and related enzymes.
  
     0.602
fxsA
[R] COG3030 Protein affecting phage T7 exclusion by the F plasmid.
  
    0.561
napD_1
Nonspecific acid phosphatase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.551
RBY4I_451
TPR domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.545
EDZ48262.1
[S] COG3126 Uncharacterized protein conserved in bacteria.
 
     0.490
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.