STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46786.1Peptidase S10, Flavivirus NS3 serine protease, putative; [QR] COG0500 SAM-dependent methyltransferases. (402 aa)    
Predicted Functional Partners:
EDZ47951.1
Conserved hypothetical protein.
  
     0.548
RBY4I_637
Conserved hypothetical protein.
  
     0.545
EDZ46489.1
Surface presentation of antigens protein.
  
     0.510
EDZ48692.1
Peptidase M56, BlaR1.
  
     0.493
EDZ44911.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
  
     0.487
EDZ48662.1
KR domain family; [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
    
  0.466
EDZ47804.1
ABC transporter, ATP-binding.
  
     0.457
EDZ48456.1
Conserved hypothetical protein; [S] COG3904 Predicted periplasmic protein.
  
     0.446
EDZ46165.1
Conserved hypothetical protein.
  
     0.441
EDZ47359.1
Luciferase-like monooxygenase family; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
  0.440
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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