STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46789.1Conserved hypothetical protein; [R] COG2319 FOG: WD40 repeat. (353 aa)    
Predicted Functional Partners:
RBY4I_57
Quinohemoprotein amine dehydrogenase, alpha subunit.
  
  0.928
qhpC
Quinohemoprotein amine dehydrogenase gamma subunit.
   
   0.897
EDZ48515.1
Nitric oxide reductase large suBunit, cytochrome b; [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.884
EDZ48643.1
Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family.
    
  0.872
EDZ45827.1
Nitric oxide reductase subunit C, cytochrome c; [C] COG2857 Cytochrome c1.
 
  0.798
EDZ45981.1
[P] COG1858 Cytochrome c peroxidase.
  
 
 0.797
yhjA
[P] COG1858 Cytochrome c peroxidase.
  
 
 0.797
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.758
RBY4I_544
Blue (type 1) copper domain; [C] COG3794 Plastocyanin.
   
   0.756
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.755
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.