STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46885.1Conserved hypothetical protein. (180 aa)    
Predicted Functional Partners:
EDZ46819.1
SAM-dependent methyltransferase; [L] COG0742 N6-adenine-specific methylase.
       0.831
EDZ47568.1
Conserved hypothetical protein.
  
     0.677
EDZ47141.1
Conserved hypothetical protein.
  
     0.669
EDZ46077.1
[S] COG1426 Uncharacterized protein conserved in bacteria.
  
     0.649
EDZ48156.1
Conserved hypothetical protein.
  
     0.638
EDZ47436.1
Conserved hypothetical protein.
  
     0.609
EDZ48400.1
Conserved hypothetical protein.
  
     0.605
cpoB
Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
     0.600
EDZ46568.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.571
EDZ45839.1
Conserved hypothetical protein.
       0.557
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.