STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46934.127kDa outer membrane protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins. (244 aa)    
Predicted Functional Partners:
EDZ48486.1
Cytochrome c family protein.
       0.773
EDZ46453.1
Thiol:disulfide interchange protein, DsbA family; [O] COG1651 Protein-disulfide isomerase.
  
     0.701
EDZ48046.1
[O] COG1495 Disulfide bond formation protein DsbB.
 
 
 0.689
EDZ46669.1
[Q] COG2132 Putative multicopper oxidases.
 
   
 0.633
EDZ46076.1
SNARE associated Golgi protein; [S] COG0398 Uncharacterized conserved protein.
 
     0.597
RBY4I_210
60Kd inner membrane protein; [U] COG0706 Preprotein translocase subunit YidC.
  
  
 0.559
EDZ48763.1
Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase.
  
     0.553
polA
DNA polymerase I superfamily; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.522
EDZ46900.1
Cytochrome c family protein.
 
     0.504
EDZ48417.1
Hypothetical protein.
       0.485
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.