STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EDZ46960.1[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain). (396 aa)    
Predicted Functional Partners:
RBY4I_359
Olfactory guanylyl cyclase GC-D, putative; [T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.863
cyaF_2
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.850
RBY4I_444
Adenylate cyclase Cya3; [R] COG0457 FOG: TPR repeat.
  
 
  0.846
RBY4I_796
Cyclic nucleotide-binding domain protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
  0.836
EDZ47235.1
Adenylyl cyclase class-3/4/guanylyl cyclase; [R] COG0457 FOG: TPR repeat.
  
  
  0.782
cyaF_1
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
 
  0.770
EDZ48604.1
[T] COG3920 Signal transduction histidine kinase.
   
 0.749
EDZ46648.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.748
RBY4I_541
Sensory box sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.737
EDZ48653.1
Virulence sensor protein BvgS; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.720
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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