STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46964.1Conserved hypothetical protein. (167 aa)    
Predicted Functional Partners:
RBY4I_933
Rb142; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.913
EDZ46933.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
     0.778
EDZ46194.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.566
EDZ47964.1
Polysaccharide biosynthesis protein; [R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
       0.539
EDZ48691.1
Sulfotransferase, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.539
RBY4I_400
Glycosyl transferase, group 1/2 family protein; [M] COG0438 Glycosyltransferase.
       0.539
EDZ47733.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.424
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.