STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ46982.1YceI like family; [S] COG2353 Uncharacterized conserved protein; Belongs to the UPF0312 family. (206 aa)    
Predicted Functional Partners:
EDZ47719.1
[C] COG3038 Cytochrome B561; Belongs to the UPF0312 family.
 
  
 0.703
RBY4I_734
Hypothetical protein.
       0.586
EDZ47245.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
       0.522
RBY4I_977
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
       0.436
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.