STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_233ABC-3; [P] COG0609 ABC-type Fe3+-siderophore transport system, permease component. (268 aa)    
Predicted Functional Partners:
znuC
High affinity zinc uptake system ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 0.999
sitA
ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA; [P] COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
 0.979
sitB
ABC Mn+2/Fe+2 transporter, ATPase subunit SitB; [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 0.975
znuA
Zinc ABC transporter, periplasmic zinc-binding protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
 
 
 0.968
zur
[P] COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
 
  
 0.882
RBY4I_93
ABC transporter, ATP-binding protein; [P] COG1122 ABC-type cobalt transport system, ATPase component.
    
  0.859
RBY4I_568
Glycine betaine/proline ABC transporter, permease protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
  
 0.852
EDZ48137.1
ABC transporter, ATP-binding protein; [P] COG1118 ABC-type sulfate/molybdate transport systems, ATPase component.
     
 0.834
EDZ48645.1
[R] COG0795 Predicted permeases; overlaps another CDS with the same product name.
     
 0.829
EDZ46731.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; [E] COG0765 ABC-type amino acid transport system, permease component.
     
 0.825
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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