STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_238Conserved hypothetical protein. (389 aa)    
Predicted Functional Partners:
EDZ48427.1
Conserved hypothetical protein.
  
     0.763
EDZ47550.1
Conserved hypothetical protein.
  
     0.733
EDZ47055.1
Conserved hypothetical protein.
  
     0.645
RBY4I_327
Divergent polysaccharide deacetylase family; [L] COG2812 DNA polymerase III, gamma/tau subunits.
  
     0.634
EDZ46165.1
Conserved hypothetical protein.
  
     0.609
EDZ46884.1
Conserved hypothetical protein.
  
     0.606
EDZ46599.1
Conserved hypothetical protein.
  
     0.603
EDZ48385.1
SH3, type 3.
  
     0.600
EDZ46070.1
Conserved hypothetical protein.
  
     0.591
EDZ47268.1
Conserved hypothetical protein.
  
     0.581
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.