STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ47186.1Conserved hypothetical protein. (136 aa)    
Predicted Functional Partners:
RBY4I_218
[R] COG3668 Plasmid stabilization system protein; Belongs to the RelE toxin family.
  
 
 0.948
EDZ46193.1
Polyhydroxyalkanoate depolymerase domain protein; [Q] COG3509 Poly(3-hydroxybutyrate) depolymerase.
 
     0.882
EDZ48604.1
[T] COG3920 Signal transduction histidine kinase.
       0.533
EDZ46096.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily, putative; [R] COG4927 Predicted choloylglycine hydrolase.
 
     0.495
cobB-2
[K] COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.414
EDZ47601.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.414
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.