STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ47215.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (168 aa)    
Predicted Functional Partners:
EDZ46771.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.939
EDZ46823.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.936
EDZ46299.1
Oxidoreductase, FAD/FMN-binding family; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.892
RBY4I_210
60Kd inner membrane protein; [U] COG0706 Preprotein translocase subunit YidC.
  
 
 0.892
EDZ46631.1
Ribonuclease BN; [S] COG1295 Predicted membrane protein.
 
     0.856
EDZ45002.1
Oxidoreductase, FAD-binding; [C] COG0633 Ferredoxin.
  
 
 0.838
EDZ48635.1
Reductive dehalogenase subfamily, putative; [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.836
EDZ46019.1
YHS domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
  0.811
EDZ47532.1
YHS domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
  0.811
EDZ48720.1
YHS domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
  0.811
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.