STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RBY4I_259ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. (718 aa)    
Predicted Functional Partners:
EDZ48440.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
 
0.928
EDZ48604.1
[T] COG3920 Signal transduction histidine kinase.
  
 0.891
EDZ46337.1
HWE histidine kinase family; [T] COG2202 FOG: PAS/PAC domain.
  
 0.879
EDZ48028.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; [T] COG2202 FOG: PAS/PAC domain.
  
 0.875
EDZ46648.1
[T] COG0642 Signal transduction histidine kinase.
  
 0.867
EDZ48653.1
Virulence sensor protein BvgS; [T] COG0642 Signal transduction histidine kinase.
 
0.858
RBY4I_541
Sensory box sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
 
0.856
serB_2
[E] COG0560 Phosphoserine phosphatase.
 
     0.841
EDZ45802.1
[T] COG0642 Signal transduction histidine kinase.
  
 0.835
RBY4I_935
[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
     0.819
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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