Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ45898.1 | EDZ46205.1 | RBY4I_1109 | RBY4I_1417 | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | 0.408 |
| EDZ45898.1 | EDZ47025.1 | RBY4I_1109 | RBY4I_2243 | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.402 |
| EDZ45898.1 | EDZ47401.1 | RBY4I_1109 | RBY4I_2619 | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | [L] COG0863 DNA modification methylase. | 0.978 |
| EDZ45898.1 | hsdM | RBY4I_1109 | RBY4I_3957 | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | 0.533 |
| EDZ46205.1 | EDZ45898.1 | RBY4I_1417 | RBY4I_1109 | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.408 |
| EDZ46205.1 | EDZ47025.1 | RBY4I_1417 | RBY4I_2243 | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.968 |
| EDZ46205.1 | EDZ47401.1 | RBY4I_1417 | RBY4I_2619 | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | [L] COG0863 DNA modification methylase. | 0.417 |
| EDZ46205.1 | hsdM | RBY4I_1417 | RBY4I_3957 | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | 0.999 |
| EDZ47025.1 | EDZ45898.1 | RBY4I_2243 | RBY4I_1109 | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.402 |
| EDZ47025.1 | EDZ46205.1 | RBY4I_2243 | RBY4I_1417 | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | 0.968 |
| EDZ47025.1 | EDZ47401.1 | RBY4I_2243 | RBY4I_2619 | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | [L] COG0863 DNA modification methylase. | 0.477 |
| EDZ47025.1 | hsdM | RBY4I_2243 | RBY4I_3957 | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | 0.982 |
| EDZ47401.1 | EDZ45898.1 | RBY4I_2619 | RBY4I_1109 | [L] COG0863 DNA modification methylase. | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.978 |
| EDZ47401.1 | EDZ46205.1 | RBY4I_2619 | RBY4I_1417 | [L] COG0863 DNA modification methylase. | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | 0.417 |
| EDZ47401.1 | EDZ47025.1 | RBY4I_2619 | RBY4I_2243 | [L] COG0863 DNA modification methylase. | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.477 |
| EDZ47401.1 | hsdM | RBY4I_2619 | RBY4I_3957 | [L] COG0863 DNA modification methylase. | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | 0.442 |
| EDZ47401.1 | modC | RBY4I_2619 | RBY4I_146 | [L] COG0863 DNA modification methylase. | Molybdate ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. | 0.416 |
| hsdM | EDZ45898.1 | RBY4I_3957 | RBY4I_1109 | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | Type III restriction enzyme, res subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.533 |
| hsdM | EDZ46205.1 | RBY4I_3957 | RBY4I_1417 | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | Type I site-specific deoxyribonuclease chain S; [V] COG0732 Restriction endonuclease S subunits. | 0.999 |
| hsdM | EDZ47025.1 | RBY4I_3957 | RBY4I_2243 | [V] COG0286 Type I restriction-modification system methyltransferase subunit. | EcoEI R C-terminal domain protein; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.982 |
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