STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ47636.1Conserved hypothetical protein. (300 aa)    
Predicted Functional Partners:
EDZ46255.1
OmpA/MotB; [P] COG0226 ABC-type phosphate transport system, periplasmic component.
 
     0.864
EDZ46665.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.761
RBY4I_461
Conserved hypothetical protein.
  
     0.761
EDZ48141.1
Response regulator receiver domain protein.
  
     0.699
EDZ48450.1
Lipoprotein, putative; [M] COG3064 Membrane protein involved in colicin uptake.
  
     0.648
RBY4I_595
Sporulation related; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.644
RBY4I_808
Conserved hypothetical protein.
  
     0.633
RBY4I_576
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.631
EDZ47183.1
Peptidoglycan-binding domain 1.
  
     0.619
EDZ46705.1
Conserved hypothetical protein.
  
     0.615
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.