STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_295Tellurite resistance protein. (131 aa)    
Predicted Functional Partners:
EDZ48554.1
Conserved hypothetical protein.
  
     0.754
EDZ48129.1
Conserved hypothetical protein.
  
    0.753
EDZ47055.1
Conserved hypothetical protein.
  
     0.718
EDZ48197.1
Conserved hypothetical protein.
  
     0.710
EDZ45996.1
TadE-like protein; [U] COG4961 Flp pilus assembly protein TadG.
  
    0.702
RBY4I_394
Conserved hypothetical protein.
  
     0.701
trgB
Tellurite resistance protein; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
       0.700
EDZ48450.1
Lipoprotein, putative; [M] COG3064 Membrane protein involved in colicin uptake.
  
     0.669
RBY4I_831
Conserved hypothetical protein; [S] COG3164 Predicted membrane protein.
  
     0.669
RBY4I_678
Acetyltransferase, gnat family; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.668
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.