STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ47767.1Conserved hypothetical protein. (372 aa)    
Predicted Functional Partners:
EDZ46984.1
VacJ family lipoprotein; [M] COG2853 Surface lipoprotein.
    
 
 0.886
EDZ46539.1
Mechanosensitive ion channel family protein; [M] COG3264 Small-conductance mechanosensitive channel.
  
     0.669
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.640
EDZ48452.1
Conserved hypothetical protein.
  
     0.634
EDZ46038.1
Conserved hypothetical protein.
  
     0.622
RBY4I_796
Cyclic nucleotide-binding domain protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
    0.585
EDZ48262.1
[S] COG3126 Uncharacterized protein conserved in bacteria.
  
     0.584
EDZ48421.1
Hypothetical protein.
       0.564
EDZ46584.1
Ion transport 2; [P] COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.557
EDZ47479.1
Conserved hypothetical protein.
  
     0.545
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.