STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_299Alcohol dehydrogenase, zinc-containing; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. (339 aa)    
Predicted Functional Partners:
EDZ48662.1
KR domain family; [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
  
 0.767
EDZ47673.1
Oxidoreductase, zinc-binding dehydrogenase family; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  0.721
argG
[E] COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
   0.659
RBY4I_627
Oxidoreductase, zinc-binding dehydrogenase family; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  0.624
EDZ46341.1
ThiJ/PfpI family protein; [R] COG0693 Putative intracellular protease/amidase.
 
   0.590
EDZ47191.1
Alcohol dehydrogenase, zinc-binding domain protein; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  0.567
EDZ48162.1
Alcohol dehydrogenase, zinc-containing; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
 
0.521
EDZ48157.1
Inositol-1-monophosphatase; [P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; Belongs to the inositol monophosphatase superfamily.
     
 0.515
ccrA
crotonyl-CoA reductase; [R] COG1064 Zn-dependent alcohol dehydrogenases.
  
  0.460
RBY4I_775
[R] COG0693 Putative intracellular protease/amidase.
 
   0.449
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.