Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_304[S] COG4103 Uncharacterized protein conserved in bacteria. (146 aa)    
Predicted Functional Partners:
EDZ48021.1
[S] COG4103 Uncharacterized protein conserved in bacteria.
 
    
0.796
EDZ46778.1
Conserved hypothetical protein; [P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
       0.791
EDZ47814.1
[S] COG5470 Uncharacterized conserved protein.
       0.648
RBY4I_480
His/Glu/Gln/Arg/opine family ABC transporter, ATP-binding protein; [P] COG1135 ABC-type metal ion transport system, ATPase component.
       0.510
RBY4I_831
Conserved hypothetical protein; [S] COG3164 Predicted membrane protein.
  
     0.487
EDZ47349.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.465
EDZ47568.1
Conserved hypothetical protein.
  
     0.445
EDZ46721.1
N-terminal double-transmembrane domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.435
RBY4I_819
[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.407
EDZ47170.1
Conserved hypothetical protein; [E] COG2981 Uncharacterized protein involved in cysteine biosynthesis.
  
     0.406
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.