STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ47978.1enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase. (348 aa)    
Predicted Functional Partners:
mmsB
[G] COG0362 6-phosphogluconate dehydrogenase; Belongs to the HIBADH-related family.
 
 0.993
EDZ48662.1
KR domain family; [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
  
 0.929
EDZ47554.1
acyl-CoA dehydrogenase family member 8; [I] COG1960 Acyl-CoA dehydrogenases.
 
  0.893
EDZ48440.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
   
 0.847
EDZ45802.1
[T] COG0642 Signal transduction histidine kinase.
   
 0.845
EDZ46648.1
[T] COG0642 Signal transduction histidine kinase.
   
 0.845
EDZ48653.1
Virulence sensor protein BvgS; [T] COG0642 Signal transduction histidine kinase.
   
 0.845
RBY4I_541
Sensory box sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
   
 0.845
EDZ47763.1
enoyl-CoA hydratase/isomerase family protein; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
  0.832
EDZ46325.1
3-ketoacyl-CoA thiolase; [I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.813
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.