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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_320Phosphonate metabolim protein, transferase hexapeptide repeat family; [R] COG0110 Acetyltransferase (isoleucine patch superfamily). (204 aa)    
Predicted Functional Partners:
RBY4I_623
Phosphonate uptake transporter; [E] COG0765 ABC-type amino acid transport system, permease component.
 
     0.733
phnE_3
Phosphonate ABC transporter, permease protein PhnE; [P] COG2011 ABC-type metal ion transport system, permease component.
 
     0.719
phnD
[P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
     0.664
RBY4I_421
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
      0.622
phnJ
Phosphonate metabolism protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
     0.557
phnK
Phosphonate C-P lyase system protein PhnK; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
     0.547
EDZ47744.1
[P] COG3626 Uncharacterized enzyme of phosphonate metabolism.
 
     0.539
EDZ48662.1
KR domain family; [IQ] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
  
  
 0.538
phnC_2
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     0.532
EDZ48131.1
Phosphonate C-P lyase system protein PhnH; [P] COG3625 Uncharacterized enzyme of phosphonate metabolism.
 
     0.526
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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