STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ48069.1Transcriptional regulator, GntR family; [K] COG1802 Transcriptional regulators. (216 aa)    
Predicted Functional Partners:
EDZ47018.1
Transcriptional regulator, GntR family; [K] COG1802 Transcriptional regulators.
  
     0.759
EDZ47875.1
Transcriptional regulator, GntR family; [K] COG1802 Transcriptional regulators.
  
     0.704
EDZ48066.1
Transcriptional regulator, IclR family; [K] COG1414 Transcriptional regulator.
  
    0.702
EDZ46738.1
Sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
       0.494
EDZ47843.1
[Q] COG2124 Cytochrome P450.
  
     0.424
hemK
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
    
   0.418
EDZ46838.1
Conserved hypothetical protein.
  
     0.411
EDZ46491.1
[E] COG0174 Glutamine synthetase.
  
     0.408
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.