STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norQNorQ protein required for nitric oxide reductase activity; [R] COG0714 MoxR-like ATPases. (264 aa)    
Predicted Functional Partners:
norD
[P] COG4548 Nitric oxide reductase activation protein.
 
  
 0.991
EDZ48515.1
Nitric oxide reductase large suBunit, cytochrome b; [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.984
EDZ45827.1
Nitric oxide reductase subunit C, cytochrome c; [C] COG2857 Cytochrome c1.
 
    0.983
RBY4I_897
Hypothetical protein.
     
 0.851
EDZ48453.1
Hypothetical protein.
       0.815
EDZ46768.1
Nirv; [S] COG1262 Uncharacterized conserved protein.
 
   
 0.571
EDZ48433.1
[E] COG1982 Arginine/lysine/ornithine decarboxylases.
   
 
 0.538
RBY4I_581
Hypothetical protein.
  
    0.536
cobT_2
Aerobic cobaltochelatase CobT subunit; [H] COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
  
 
 0.504
nosZ
Cytochrome C oxidase subunit II, periplasmic domain protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
  
  
 0.485
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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