STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttg2DToluene tolerance protein Ttg2D; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. (195 aa)    
Predicted Functional Partners:
EDZ48282.1
ABC transporter substrate binding protein; [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.993
EDZ46984.1
VacJ family lipoprotein; [M] COG2853 Surface lipoprotein.
 
 
 
 0.981
RBY4I_807
ABC transporter, ATP-binding protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.979
EDZ46145.1
Membrane protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 
 0.971
EDZ48710.1
[V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.587
EDZ47055.1
Conserved hypothetical protein.
  
     0.546
EDZ48554.1
Conserved hypothetical protein.
  
     0.527
EDZ48500.1
Conserved hypothetical protein.
  
     0.526
EDZ48294.1
Type I secretion membrane fusion protein, HlyD; [M] COG0845 Membrane-fusion protein.
  
    0.524
EDZ46122.1
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
 
     0.522
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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