Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EDZ48329.1Conserved hypothetical protein. (68 aa)    
Predicted Functional Partners:
EDZ46722.1
Transcriptional regulator, XRE family; [K] COG1396 Predicted transcriptional regulators.
 
     0.911
EDZ46022.1
[I] COG3239 Fatty acid desaturase.
 
     0.879
cysC
ATP-sulfurylase family; Catalyzes the synthesis of activated sulfate.
    
  0.826
EDZ46398.1
Ribosomal protein L35; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.742
EDZ46778.1
Conserved hypothetical protein; [P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
  
     0.526
EDZ48516.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
  0.453
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
    
  0.453
EDZ47241.1
HIT family protein; [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
     
  0.404
soxY
Sulfur oxidation Y protein; [S] COG5501 Predicted secreted protein.
  
  
  0.403
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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