STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ48353.1Conserved hypothetical protein. (226 aa)    
Predicted Functional Partners:
EDZ47811.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.584
EDZ46336.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.539
EDZ45863.1
Pyrroline-5-carboxylate reductase, putative; [E] COG0345 Pyrroline-5-carboxylate reductase.
  
     0.497
EDZ47733.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.480
EDZ48692.1
Peptidase M56, BlaR1.
  
     0.462
RBY4I_747
Peptidoglycan-binding LysM; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.458
EDZ48452.1
Conserved hypothetical protein.
  
     0.452
EDZ47159.1
Peptidoglycan-binding LysM; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.445
EDZ46380.1
[L] COG1466 DNA polymerase III, delta subunit.
  
     0.440
EDZ48620.1
Conserved hypothetical protein.
  
     0.439
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.