STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_359Olfactory guanylyl cyclase GC-D, putative; [T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain). (352 aa)    
Predicted Functional Partners:
EDZ47543.1
Protozoan/cyanobacterial globin family protein; [R] COG2346 Truncated hemoglobins.
 
     0.940
EDZ48693.1
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.894
EDZ48079.1
Adenylate/guanylate cyclase; [C] COG0633 Ferredoxin.
  
  
  0.880
EDZ46918.1
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.874
EDZ46960.1
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.865
EDZ45814.1
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.854
RBY4I_444
Adenylate cyclase Cya3; [R] COG0457 FOG: TPR repeat.
  
 
 0.851
cyaF_2
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
  
  0.816
moaA_1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
   
 
  0.815
EDZ47235.1
Adenylyl cyclase class-3/4/guanylyl cyclase; [R] COG0457 FOG: TPR repeat.
  
  
  0.767
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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