STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ48454.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (95 aa)    
Predicted Functional Partners:
EDZ48341.1
[N] COG5443 Flagellar biosynthesis regulator FlbT.
   
    0.998
EDZ46870.1
Flagellar protein FlaF, putative; [N] COG5442 Flagellar biosynthesis regulator FlaF.
   
    0.955
EDZ48549.1
[T] COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
   
    0.955
EDZ46955.1
[N] COG1536 Flagellar motor switch protein.
  
    0.873
flgK
[N] COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
   
    0.806
EDZ48483.1
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.761
RBY4I_973
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.761
EDZ48310.1
Conserved hypothetical protein; [U] COG4961 Flp pilus assembly protein TadG.
  
    0.731
EDZ46002.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.727
EDZ47711.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.713
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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