STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ48529.1[NT] COG0840 Methyl-accepting chemotaxis protein. (490 aa)    
Predicted Functional Partners:
RBY4I_215
CheW protein; [NT] COG0835 Chemotaxis signal transduction protein.
 
 0.990
EDZ48028.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; [T] COG2202 FOG: PAS/PAC domain.
 
 0.985
EDZ46337.1
HWE histidine kinase family; [T] COG2202 FOG: PAS/PAC domain.
 
 0.977
cheA
Chemotaxis protein CheA; [T] COG0642 Signal transduction histidine kinase.
 
 0.965
EDZ46606.1
Hypothetical protein; [T] COG2202 FOG: PAS/PAC domain; PAS fold family.
 
 
  0.948
EDZ45829.1
Hypothetical protein; [T] COG2202 FOG: PAS/PAC domain; PAS fold family.
 
 
  0.946
RBY4I_235
[NT] COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.944
EDZ46837.1
Conserved hypothetical protein; [T] COG2202 FOG: PAS/PAC domain.
 
 
  0.941
cheB
Protein-glutamate methylesterase; [NT] COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 0.931
cheR
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 0.927
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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