STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ48603.1Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase. (835 aa)    
Predicted Functional Partners:
EDZ48232.1
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
 
 
0.953
EDZ48121.1
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
 
 
0.944
EDZ46594.1
Transcriptional repressor, CopY family; [K] COG3682 Predicted transcriptional regulator.
  
  
 0.933
cueR
[K] COG0789 Predicted transcriptional regulators.
  
 0.910
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.789
nirK
Nitrite reductase, copper-containing; [Q] COG2132 Putative multicopper oxidases; Belongs to the multicopper oxidase family.
 
 
 0.754
EDZ46864.1
Ferritin and Dps; [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
  
 0.753
EDZ46669.1
[Q] COG2132 Putative multicopper oxidases.
 
 
 0.731
EDZ46770.1
Potassium efflux system protein; [P] COG0475 Kef-type K+ transport systems, membrane components; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.721
EDZ48217.1
[Q] COG2132 Putative multicopper oxidases.
 
 
 0.719
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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